Research Publications
2023 Publications
Department | Author/s | Type | Reference |
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Biomedical Engineering UofL | Hermann B Frieboes | Publication | Evaluation of innate and adaptive immune system interactions in the tumor microenvironment via a 3D continuum model. Dylan A Goodin, Hermann B Frieboes, Journal of Theoretical Biology Volume 559,21 February 2023, 1113832023. https://www.sciencedirect.com/science/article/pii/S0022519322003745 |
Biomedical Engineering UofL | Hermann B Frieboes | Publication | Multiple breast cancer liver metastases response to macrophage-delivered nanotherapy evaluated via a 3D continuum model. Dylan A Goodin, Eric Chau, Anjana Tiwari, Biana Godin, Hermann B Frieboes; Immunology 2023 Jun;169(2):132-140 https://onlinelibrary.wiley.com/doi/full/10.1111/imm.13615
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Chemistry | Risko, Chad | Publication | Resonant X‑ray Diffraction Reveals the Location of Counterions in Doped Organic Mixed Ionic Conductors. L.Q. Flagg, J.W. Onorato, C.K. Luscombe, V. Bhat, C. Risko, B. Levy-Wendt, M.F. Toney, C.R. McNeill, G. Freychet, M. Zhernenkov, R. Li & L.J. Richter. Chemistry of Materials (2023) 35, 10, 3960–3967. DOI: 10.1021/acs.chemmater.3c00180 |
Chemistry | Risko, Chad | Publication | Probing Redox Properties of Extreme Concentrations Relevant for Nonaqueous Redox-Flow Batteries. N. Stumme, A.S. Perera, A. Horvath, S. Ruhunage, D.H. Duffy, E.M. Koltonowski, J. Tupper, C. Dzierba, A.D. McEndaffer, C.M. Teague, C. Risko & S.K. Shaw. ACS Energy Materials (2023), 6, 5, 2819-2831. DOI: 10.1021/acsaem.2c03712 |
Chemistry | Risko, Chad | Publication | Electronic, Redox, and Optical Property Prediction of Organic π-conjugated Molecules through a Hierarchy of Machine Learning Approaches. V. Bhat, P. Sornberger, B.S.S. Pokuri, R. Duke, B. Ganapathysubramanian & C. Risko. Chemical Science (2023), 14, 203-213. DOI: 10.1039/D2SC04676H |
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2022 Publications
Department | Author/s | Type | Reference |
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Chemistry | Risko, Chad | Publication | Large Variability and Complexity of Isothermal Solubility for a Series of Redox-Active Phenothiazines. A.S. Perera, T.M. Suduwella, N.H. Attanayake, R.K. Jha, W.L. Eubanks, I. Shkrob, C. Risko, A.P Kaur & S.A. Odom. Materials Advances (2022), 3, 8705-8715. DOI: 10.1039/D2MA00598K |
Chemistry | Risko, Chad | Publication | The Role of Crystal Packing on the Optical Response of Trialkyltetrelethynyl Acenes. L.Y. Huang, Q. Ai & C. Risko. Journal of Chemical Physics (2022), 157, 084703. DOI: 10.1063/5.0097421 |
CME | Shao, Qing | Publication | "Abbas, Usman L; Qiao, Qi; Nguyen, Manh Tien; Shi, Jian; Shao, Qing;", Molecular dynamics simulations of heterogeneous hydrogen bond environment in hydrophobic deep eutectic solvents, AIChE Journal,68,1,e17382, 2022,"John Wiley & Sons, Inc. Hoboken, USA" |
CME | Shao, Qing | Publication | "Qiao, Qi; Cai, Lirong; Shao, Qing; ",Molecular simulations of zwitterlation-induced conformation and dynamics variation of glucagon-like peptide-1 and insulin, Journal of Materials Chemistry B,10,14,2490-2496, 2022, Royal Society of Chemistry |
CME | Shao, Qing | Publication | "McMullen, Patrick; Fang, Liang; Qiao, Qi; Shao, Qing; Jiang, Shaoyi;" ,Impacts of a Zwitterionic Peptide on its Fusion Protein,Bioconjugate Chemistry,33,8,1485-1493, 2022, American Chemical Society |
CME | Shao, Qing | Publication | "Zhang, Zhuangzhuang; Cheng, Lijun; Li, Jie; Qiao, Qi; Karki, Anju; Allison, Derek B; Shaker, Nuha; Li, Kunyu; Utturkar, Sagar M; Atallah Lanman, Nadia M;" ,Targeting Plk1 sensitizes pancreatic cancer to immune checkpoint therapy,Cancer Research,,,,2022, AACR |
CME | Shao, Qing | Publication | "McMullen, Patrick; Qiao, Qi; Luozhong, Sijin; Cai, Lirong; Fang, Liang; Shao, Qing; Jiang, Shaoyi; ", Motif-based zwitterionic peptides impact their structure and immunogenicity, Chemical Science,,,,2022, Royal Society of Chemistry |
Molecular and Cellular Biochemistry | Moseley, Hunter | Publication | Huan Jin and Hunter N.B. Moseley. "md_harmonize: "A Python package for atom-level harmonization of public metabolic data-bases" bioRxiv 2022.12.08.519680 (2022).
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Molecular and Cellular Biochemistry | Moseley, Hunter | Publication | Robert M Flight, Praneeth S Bhatt, and Hunter N.B. Moseley. "Information-Content-Informed Kendall-tau Correlation: Utilizing Missing Values" bioRxiv 2022.02.24.481854 (2022). |
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2021 Publications
2020 Publications
Department | Author/s | Type | Reference |
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AG | Ravat, Dhananjay | Publication | Ravat, D., M. Purucker, N. Olsen, Lunar magnetic field models from Lunar Prospector and SELENE/Kaguya along-track magnetic field gradients, Journal of Geophysical Research: Planets (IF 3.713) Pub Date : 2020-06-16 , DOI: Link10.1029/2019je006187 |
CoE | Zhu, Caigang | Publication | Evan Carrico, Tengfei Sun, and Caigang Zhu, Numerical investigation of depth-sensitive diffuse reflectance and fluorescence measurements on murine subcutaneous tissue with growing solid tumors. Biomedical Optics Express, Vol. 11, Issue 11, pp. 6311-6323 Pub Date: (2020) https://doi.org/10.1364/BOE.405321 |
AG | Kalbfleisch, Ted | Publication | Kalbfleisch T, Petersen JL, Tait Jr. RG, Qiu J, Basnayake V., Hackett P, Heaton MP. Using triallelic SNPs for determining parentage in North American yak (Bos grunniens) and estimating cattle (B. taurus) introgression [version 2; peer review: 2 approved]. F1000Research 2020, 9:1096 (https://doi.org/10.12688/f1000research.25803.2) |
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2019 Publications
Department | Author/s | Type | Reference |
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ECE | Adams, Robert J | Publication | A. Pfeiffer, J. C. Young, R. J. Adams, and S. D. Gedney, ""Higher-order simulation of impressed current cathodic protection systems,"" Journal of Computational Physics, vol. 394, pp. 522-531, October 2019. doi: 10.1016/j.jcp.2019.06.008 |
ECE | Adams, Robert J | Magazine | J. C. Young, ""Higher-Order Mesh Generation Using Linear Meshes [EM Programmer's Notebook]," in IEEE Antennas and Propagation Magazine, vol. 61, no. 2, pp. 120-126, April 2019. doi: 10.1109/MAP.2019.2895599" |
ECE | Adams, Robert J | Conference Proceeding | R. J. Adams, O. T. Wilkerson, J. C. Young, I. Chowdury, and W. Thiel, "Localizing sparse direct solvers for circuit simulations," Proceedings of the 2019 IEEE/MTT-S International Microwave Symposium, pp. 128-131, 2019. |
ECE | Adams, Robert J | Conference Proceeding | J. C. Young, R. A. Pfeiffer, and R. J. Adams, "Corrosion-Related Magnetostatic Field Analysis," 2019 IEEE International Symposium on Antennas and Propagation and USNC-URSI Radio Science Meeting, Atlanta, GA, July 8 - July 12, 2019. |
ECE | Adams, Robert J | Conference Proceeding | R. J. Adams, O. T. Wilkerson, J. C. Young, and S. D. Gedney, "Binormalized Factorizations for Magnetostatic Integral Equations," 2019 IEEE International Symposium on Antennas and Propagation and USNC-URSI Radio Science Meeting, Atlanta, GA, July 8 - July 12, 2019. |
CoP | Anderson, Brad | Publication | T.-X. Xiang and B.D. Anderson, Effects of molecular interactions on miscibility and mobility of ibuprofen in amorphous solid dispersions with various polymers. J. Pharm. Sci., 108, 178-186 (2019)." |
A&S | Awuah, Samuel G | Publication | Gukathasan, S.; Parkin, S.; Awuah, S. G. Cyclometalated Gold(III) Complexes Bearing DACH Ligands. Inorganic Chemistry 2019, 58, 149326-9340 |
A&S | Awuah, Samuel G | Publication | Kim, J. H.; Mertens, R. T.; Agarwal, A.; Parkin, S.; Berger, G.; Awuah, S. G. Direct intramolecular carbon(sp2)–nitrogen(sp2) reductive elimination from gold(iii). Dalton Trans. 2019, 48, 6273-6282. |
A&S | Awuah, Samuel G | Publication | Mertens, R. T., Kim, J. H., Jennings, W. C., Parkin, S., Awuah, S. G. Revisiting the reactivity of tetrachloroauric acid with N, N-bidentate ligands: structural and spectroscopic insights. Dalton Trans 2019, 48, 2093-2099" |
AG | Ball, Barry A | Publication | Dini P, Kalbfleisch T, Daels P, Carossino M, El-Sheikh Ali H, Loux SC, Esteller-Vico A, Scoggin KE, Ball BA. Monoallelic gene expression; a closer look at reciprocal paternal and maternal gene interaction in equine placenta. Genome Res (submitted) 2019 |
AG | Ball, Barry A | Publication | Dini P, Norris J, El-Sheikh Ali H, Loux SC, Carossino M, Esteller-Vico A, Bailey E, Kalbfleisch T, Daels P, Ball BA. Landscape of overlapping gene expression in the equine chorioallantois. Genes 2019, 10, 503; doi:10.3390/genes10070503 |
AG | Ball, Barry A | Publication | Boakari YL, El-Sheikh Ali H, Dini P, Loux SC, Fernandes CB, Scoggin KE, Esteller-Vico A, Lawrence L, Ball BA. A high protein model alters the endometrial transcriptome of mares. Genes (accepted with revisions) 2019 |
AG | Ball, Barry A | Publication | Loux SC, Dini P, El-Sheikh Ali H, Kalbfleisch T, Ball BA. Characterization of the placental transcriptome through mid-late gestation in the mare. Placenta (In draft) 2019 |
AG | Ball, Barry A | Publication | Loux SC, Fernandes CB, Dini P, Wang K, Wu X, Baxter D, Troedsson MH, Squires EL, Ball BA. Small RNA expression in the chorioallantois, endometrium and serum of mares following experimental induction of placentitis. Rep Fertil Devel 31:1144-1156, 2019 |
AG | Ball, Barry A | Conference Proceeding | El-Sheikh Ali H, Loux SC, Boakari Y, Fernandes CB, Esteller-Vico A, Scoggin KE, Ball BA. Transcriptomic analysis of the equine cervix during placentitis. Plant & Animal Genome Conference (PAG), January 12-16, 2019. |
AG | Ball, Barry A | Conference Proceeding | El-Sheikh Ali H, Loux SC, Boakari Y, Dini P, Scoggin KE, Kalbfleisch T, Esteller-Vico A, Ball BA. Transcriptome analysis reveals the key regulators and molecular mechanisms underlying myometrial activation during equine placentitis. Society for the Study of reproduction (SSR), July 18-21, 2019. |
AG | Ball, Barry A | Conference Proceeding | Loux SC, Ball BA. New insights into gestational endocrinology of the mare. Society for the Study of reproduction (SSR), July 18-21, 2019. |
AG | Ball, Barry A | Conference Proceeding | Boakari YL, Loux SC, El-Sheikh Ali H, Dini P, Fernandes CB, Scoggin KE, Lawrence LM, Esteller-Vico A, Ball BA. Effects of intravenous infusion of urea on the endometrial transcriptome of mares. In: International Plant and Animal Genome, 2019, San Diego, CA. PAG XXVII, 2019. |
CoE | Brehm, Christoph | Publication | Brehm, M.F. Barad, and C. C. Kiris “Development of Immersed Boundary Computational Aeroacoustic Prediction Capabilities for Open-Rotor Noise”, Journal of Computational Physics, 2019, Volume 388, 690- 716 |
CoE | Brehm, Christoph | Publication | O.M.F. Browne, A.P. Haas, H.F. Fasel, A. Haas, and C. Brehm “An Efficient Linear Wave Packet Tracking Strategy Method for Hypersonic Boundary-Layer Stability Prediction”, Journal of Computational Physics, Volume 380, 243-268, 2019 |
CoE | Brehm, Christoph | Publication | O.M.F. Browne, A.P. Haas, H.F. Fasel, and C. Brehm, “A Nonlinear Wavepacket Tracking Method for 3-D Hypersonic Transition Problems”, Journal of Computational Physics, 2019, submitted 11 |
CoE | Brehm, Christoph | Publication | A.P. Haas, O.M.F. Browne, H.F. Fasel, and C. Brehm, “A Time-Spectral Numerical Jacobian Based Lin- earized Navier-Stokes Solver For Hypersonic Boundary-Layer Stability”, Journal of Computational Physics, 2019, revision completed |
CoE | Brehm, Christoph | Publication | J. Boustani, M. Barad, C. Kiris, and C. Brehm, “An FD Immersed Boundary Fluid — FE Structure Inter- action Method for Thin, Highly Compliant Structures”, Journal of Computational Physics, 2019, submitted |
CoE | Brehm, Christoph | Publication | J. Davis, S. Ganju, S. Bailey and C. Brehm, “Effects of Rotation on Turbulent Kinetic Energy Budget in Turbulent Pipe Flows”, Journal of Fluid Mechanics, 2019, in preparation |
CoE | Brehm, Christoph | Publication | S. Ganju, J. Davis, S. Bailey and C. Brehm, “A Numerical Investigation of Turbulent Channel Flows with Wavy Walls: Turbulent Budgets and Reynolds Stress Tensor”, Physics of Fluids, 2019, in preparation |
CoE | Brehm, Christoph | Publication | C. Brehm, and N. Ashton, “An Immersed Boundary Method with a Non-Equilibrium RANS-Based Wall Model”, Journal of Computational Physics, 2019, in preparation" |
CoE | Brehm, Christoph | Conference Proceeding | Browne, S. Hasnine, and C. Brehm, “Towards Modeling and Simulation of Particulate Interactions with High-Speed Transitional Boundary-Layer Flows”, AIAA 2019-2971, incl. presentation at 2019 AIAA Aviation, 17-21 June, Dallas, TX |
CoE | Brehm, Christoph | Conference Proceeding | J. Davis, S. Ganju, S. Bailey and C. Brehm, “A DNS Study to Investigate Turbulence Suppression in Rotating Pipe Flows”, AIAA 2019-3639, incl. presentation at 2019 AIAA Aviation, 17-21 June, Dallas, TX |
CoE | Brehm, Christoph | Conference Proceeding | N. Ashton, J. Davis, and C. Brehm, “Assessment of the Elliptic Blending Reynolds Stress Model for a Rotating Turbulent Pipe Flow Using New DNS Data”, AIAA 2019-2966, incl. presentation at 2019 AIAA Aviation, 17-21 June, Dallas, TX |
CoE | Brehm, Christoph | Conference Proceeding | J. Boustani, M. Barad, C. Kiris and C. Brehm, “Fully-Coupled Fluid-Structure Interaction Simulations of a Supersonic Parachute”, AIAA 2019-3279, incl. presentation at 2019 AIAA Aviation, 17-21 June, Dallas, TX |
CoE | Brehm, Christoph | Conference Proceeding | S. Ganju, J. Davis, S. Bailey and C. Brehm, “Direct Numerical Simulations of Turbulent Channel Flows with Two- and Three-Dimensional Superimposed Sinusoidal Roughness”, AIAA 2019-3641, incl. presentation at 2019 AIAA Aviation, 17-21 June, Dallas, TX |
CoE | Brehm, Christoph | Conference Proceeding | C. Brehm, J. Davis, S. Ganju, and S. Bailey, “A Numerical Investigation of the Effects of Rotation on Turbulent Pipe Flows”, Eleventh International Symposium on Turbulence and Shear Flow Phenomena, TSFP-11, July 30 to August 2, 2019, Southampton, UK |
CoE | Brehm, Christoph | Conference Proceeding | S. Ganju, J. Davis, S. Bailey, and C. Brehm, “Direct Numerical Simulations of Turbulent Channel Flows with Sinusoidal Walls”, AIAA 2019-2141, incl. presentation at AIAA Science and Technology Forum and Exposition, 7-11 January, San Diego, CA |
CoE | Brehm, Christoph | Conference Proceeding | J. Boustani, O.M.F. Browne, J. Wenk, M. Barad, C. Kiris, and C. Brehm, “Fluid-Structure Interactions with Geometrically Nonlinear Deformations”, AIAA 2019-1896, incl. presentation at AIAA Science and Technology Forum and Exposition, 7-11 January, San Diego, CA |
CoE | Brehm, Christoph | Conference Proceeding | O. Browne, and C. Brehm “Efficient Strategy for Tracking Wavepackets in Hypersonic Boundary Layers” Blue Waters Symposium, June 2-6, 2019 Sunriver, OR |
A&S | Crawford, Christopher B | Publication | “A Lightweight Method for Real-Time Waveform Fitting with Background Noise Rejection”, A. P. Jezghani, and L. J. Broussard, C. B. Crawford, IEEE Transactions in Nuclear Physics, 2019. (pending) |
A&S | Crawford, Christopher B | Conference Proceeding | L.J. Broussard {\it et al.}, ``Using Nab to determine correlations in unpolarized neutron decay'', {http://dx.doi.org/10.1007/s10751-018-1538-7}{Hyperfine Interact. 240, 1 (2019)}, http://arxiv.org/abs/arXiv:1812.08258}{arXiv:1812.08258}. |
A&S | Crawford, Christopher B | Conference Proceeding |