Jupyter Notebook on LCC

Owned by UKY CCS RCD
Aug 08, 2024
3 min read


CCS supports jupyter notebooks on the HPC clusters. If you need an account to run jupyter notebooks, please send a note to accounts@ccs.uky.edu


You have a few options if you need to access Jupyter Notebook on the clusters.

  • Option A: Using the Miniconda/conda module, install  Jupyter Notebook in your LCC account just like you install any conda package. You can start that notebook on a compute node and access it through a browser interactively using Open OnDemand /wiki/spaces/PreReleaseUKYHPCDocs/pages/7279994 


  • Option B: We have a couple of Jupyter containers (for CPU and GPU), and the job submission scripts are in the folder /share/examples/LCC/jupyter. After you submit the job using our job submission script (submit.sh), you will get an automated email once the notebook is running on the cluster compute node giving you instructions on how to access the notebook (compute node and port details) 


  • Option C: You can open an interactive session using Open OnDemand /wiki/spaces/PreReleaseUKYHPCDocs/pages/7279994. 

    Once your VNC session is active, open a terminal in your session and go the folder where you want to start the Jupyter notebook and type the following commands

    module load ccs/conda/notebook-6.1.4
start-notebook

    After your notebook session starts, click the  the ccs-software logo at the bottom of the VNC session and open the Firefox browser and type the URL shown in the terminal to open the notebook






CCS supports jupyter notebooks on the HPC clusters. If you need an account to run jupyter notebooks, please send a note to accounts@ccs.uky.edu


You have a few options if you need to access Jupyter Notebook on the clusters.

  • Option A: Using the Miniconda/conda module, install  Jupyter Notebook in your LCC account just like you install any conda package. You can start that notebook on a compute node and access it through a browser interactively using Open OnDemand /wiki/spaces/PreReleaseUKYHPCDocs/pages/7279994 


  • Option B: We have a couple of Jupyter containers (for CPU and GPU), and the job submission scripts are in the folder /share/examples/LCC/jupyter. After you submit the job using our job submission script (submit.sh), you will get an automated email once the notebook is running on the cluster compute node giving you instructions on how to access the notebook (compute node and port details) 


  • Option C: You can open an interactive session using Open OnDemand /wiki/spaces/PreReleaseUKYHPCDocs/pages/7279994. 

    Once your VNC session is active, open a terminal in your session and go the folder where you want to start the Jupyter notebook and type the following commands

    module load ccs/conda/notebook-6.1.4
start-notebook

    After your notebook session starts, click the  the ccs-software logo at the bottom of the VNC session and open the Firefox browser and type the URL shown in the terminal to open the notebook





Center for Computational Sciences