WhatsHap

Software Description:

WhatsHap is a software for phasing genomic variants using DNA sequencing reads, also called read-based phasing or haplotype assembly. It is especially suitable for long reads, but works also well with short reads.


Software Home Page: WhatsHap


Software Documentation:

To run this software in a Linux environment on LCC,
run the command(s):

#To load module
module load ccs/conda/whatshap-0.18

#To unload module
conda deactivate

Center for Computational Sciences