bioconductor-DESeq

Software Description:

DESeq is an R package to analyse count data from high-throughput sequencing assays such as RNA-Seq and test for differential expression. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution

Software Home Page: bioconductor DESeq

Software Documentation:

To run this software in a Linux environment on LCC,
run the command(s):

#To load module for version 1.22.1
module load ccs/conda/bioconductor-deseq2-1.22.1

#To load module for version 1.24.0
module load ccs/conda/bioconductor-deseq2-1.24.0

#To unload module per version
conda deactivate