bioconductor-edgeR

Software Description:

The empirical analysis of digital gene expression data in R. A software package for the differential expression analysis of digital gene expression data, that is, of count data arising from DNA sequencing technologies. It is specially designed for differential expression analyses of RNA-Seq or SAGE data, or differential marking analyses of ChIP-Seq data.


Software Home Page: Bioconductor-edgeR



Software Documentation:

To run this software in a Linux environment on LCC,
run the command(s):

#To load module
module load ccs/conda/bioconductor-edger-3.26.0

#To unload module
conda deactivate

Center for Computational Sciences